Set cluster resolution — setResolution • scMiko

Set 'Seurat_Clusters' metadata entry to specified cluster resolution [0, inf]. Wrapper for Seurat's FindClusters() function.

setResolution(
  object,
  resolution,
  assay = DefaultAssay(object),
  use.existing.clusters = T,
  ...
)

Arguments

object: Seurat Object
resolution: Numeric [0, inf] specifying cluster resolution. Values [0.1,1] typically perform well.
assay: Seurat assay to check for existing clustering at specified resolution.
use.existing.clusters: Logical flag specifying whether to use existing clustering solution if it already exists for specified resolution.
...: additional arguments passed to Seurat::FindClusters(...)

Value

Seurat object

See also

FindClusters

Author

Nicholas Mikolajewicz