QC scatter plots

Pairwise relationships between 1) UMI count/cell and mitchondrial content, 2) gene count/cell and mitochondrial content, and 3) UMI count/cell and gene count/cell. Cellular density is computed and overlayed as color on scatter plot.

QC.scatterPlot(so, legend.width = 1, ...)

Arguments

so

Seurat Object

legend.width

numeric specifying legend width (in cm)

...

additional parameters passed to scMiko::getDensity().

Value

ggplot handle